| Key | Value |
|---|---|
| FileSize | 520158 |
| MD5 | A392267DC65DB0A4694F2052AD5A1EEB |
| PackageDescription | Test data for HTSlib HTSlib is an implementation of a unified C library for accessing common file formats, such as SAM (Sequence Alignment/Map), CRAM and VCF (Variant Call Format), used for high-throughput sequencing data, and is the core library used by samtools and bcftools. HTSlib only depends on zlib. It is known to be compatible with gcc, g++ and clang. . HTSlib implements a generalized BAM (binary SAM) index, with file extension ‘csi’ (coordinate-sorted index). The HTSlib file reader first looks for the new index and then for the old if the new index is absent. . This package contains test files and scripts for the HTSlib. |
| PackageMaintainer | Ubuntu Developers <ubuntu-devel-discuss@lists.ubuntu.com> |
| PackageName | htslib-test |
| PackageSection | science |
| PackageVersion | 1.2.1-2ubuntu1 |
| SHA-1 | 12C5DB4A2FAB9219B6EDEC76364B80DFCB47FD6C |
| SHA-256 | 59D9C54758CE4ACBD4131F343192EDC8F8D06CFA98B2DD5BA2BAD9FAB0794931 |
| hashlookup:children-total | 47 |
| hashlookup:trust | 50 |
The searched file hash includes 47 children files known and seen by metalookup. A sample is included below:
| Key | Value |
|---|---|
| FileName | ./usr/share/doc/staden-io-lib/test/data/c1#clip.sam |
| FileSize | 337 |
| MD5 | 85FE4FD282E64ADB93B5B7789F2632F0 |
| SHA-1 | 06FC71F18C86EE0B3C2D0FB8DD8B7A5605A1C60C |
| SHA-256 | F522DE0896725DD706BED7F13E50B51747BDA1CF1819C87B9B754262851186AB |
| SSDEEP | 6:hAc050o3MU108N0l3/un9o3GxvYAMsPHPjVA9o3/jV94Un3icV9HkE/f:hnSl1PON6YqvJrvJ/y89EA |
| TLSH | T14AE042102F941CA2790D68504E46C8FB99EE110CBD8D19A4DAA8F3003F9DBC06576CAF |
| Key | Value |
|---|---|
| FileName | ./usr/share/htslib-test/c1#pad3.sam |
| FileSize | 665 |
| MD5 | F765199250CABEA6204DD784C06E69AB |
| SHA-1 | 0F301695BD55C929A170C2A76644F29AFD9E2299 |
| SHA-256 | 719FF6BF5B7A4D2552AEFCA0E1673182C4F9D299051F386C35B687D8A39833FB |
| SSDEEP | 12:hs8EapTj0g0Kq02HnlZwKIcjVuJcpH900St:hKa9x4PHnlSKIcjVuJcpd/St |
| TLSH | T1B3011C761D4B4C353D296E124E52D6FB55AC1C98BBCC22D58850DB1A3B91BA088F0C5E |
| Key | Value |
|---|---|
| FileName | ./usr/lib/R/site-library/Rhtslib/testdata/xx#rg.sam |
| FileSize | 517 |
| MD5 | 2D298FB75099FBF0C1EDA326536DF856 |
| SHA-1 | 17346AFCDECA5C01A6650F01758E4947203276D4 |
| SHA-256 | 82E3B5CFB195203366B212FF2FBAB9E25E66D090938ABE2EB238476E49AFBEE0 |
| SSDEEP | 12:tXFOsKLF0N6DKvo8XTQi05MYu5FEnr8hr8Hr/:lFhWE6DhmQiy6FXa7 |
| TLSH | T115F0A7BA3DA5BC657B827A795BF248F92C6C861F595D2F00C9C0F3222ACFD8DC824005 |
| Key | Value |
|---|---|
| FileName | ./usr/share/htslib-test/ce#tag_depadded.sam |
| FileSize | 1634 |
| MD5 | 51517E279D1153C443B166C30360E406 |
| SHA-1 | 1D6B796CD710762B08F1A5DA0FF104F2811806EB |
| SHA-256 | 5FB60020909D067BC7C25CAC04E149BAA702E449A0621BE414F18F0D6E4A4F12 |
| SSDEEP | 24:lPSjag41ggggggggggBODpggggggggggBOCRPggggggggggG02ggggggggggBOGO:lPSjKPiyLxah |
| TLSH | T15C318BF6F9A13475ABE71D2E1A205BE8281D1F6A1C8B78533CDF701C8AA105B0F14CB9 |
| Key | Value |
|---|---|
| FileName | ./usr/share/doc/staden-io-lib/test/data/aux#aux.sam |
| FileSize | 727 |
| MD5 | 081E865B741789771370F69BA04A6AF5 |
| SHA-1 | 1DD616086DE09F293A8EACA65628D9B3F5E17218 |
| SHA-256 | 5983FA1F461ADC63174FBE412F6ED1BD2B4EA9ACD97B60AD9F649929DE2C9506 |
| SSDEEP | 12:vY2lq9E65I4dImKMfxhrzStdfqJbBPMENYPFOZb4nm2PEmS5/pBb4/vD:zgE65JamKMfxhrzEfqVJyd60nb5ebyD |
| TLSH | T17701903DD7848E3412E11816526A0BFA3C1FA20F62BD7791604AE14607FCC11A0F60C9 |
| Key | Value |
|---|---|
| FileName | ./usr/share/htslib-test/test-regidx.c |
| FileSize | 4271 |
| MD5 | B41FB1B08E60F3D265FDF764D36E49F7 |
| SHA-1 | 24763D760512DD5CCFB33E5643C906F02261ED67 |
| SHA-256 | 764DC910E472010922A09F6F168488C2E6EA5FB3D758B2F6888D24BA12A1250B |
| SSDEEP | 96:tuJQHDo61+rvL/IwWF2Y73Y+TZEORQ/ZQZzZOKM:gQHDf+rvL/IDO+dETG9OKM |
| TLSH | T13491A71C11670D5AFB7245382B8FB858A329301BF5CAC614FB0C72545F848B86ABFF84 |
| Key | Value |
|---|---|
| FileName | ./usr/share/htslib-test/ce#unmap1.sam |
| FileSize | 2769 |
| MD5 | 83B37BD57B14CAF7D78B2B2F102B752F |
| SHA-1 | 29680542FF9C75D1A204640303364D4E58D367A9 |
| SHA-256 | F488FE2A18F5714817EFD0B3A3C951E2C260DC199C3C4830EA2541A80B8CAF0B |
| SSDEEP | 48:dBdFMCiuSDePUf6rcP6xd1u2MpKBias0T36B7QxLhckVOe:d7FMpuSDePUircCN9NUas0T3gQcUOe |
| TLSH | T168514BF0EBA56FF05356141B025AABB60CFC7C2B4E8BD1211DDD10159FA0A06F97B14E |
| Key | Value |
|---|---|
| FileName | ./usr/share/htslib-test/test/test-vcf-sweep.out |
| FileSize | 92 |
| MD5 | 539AE2491F4B5CF27F13E72E5436ED0F |
| SHA-1 | 2F8A4E704375B254012180392B6D2F254B74DDBC |
| SHA-256 | ABD94BB48C3808E01FDC98D7FE35915AFBB48C8FEDD945216572CB11283FF247 |
| SSDEEP | 3:uvKLRM4XmUODVNMRM4XmUOLFwVfSB8Vv:uvKtkNyU8SBG |
| TLSH | T1B8B0025004068125699775F91780B80C803192217502D4047130CD643391490A501C66 |
| Key | Value |
|---|---|
| FileName | ./usr/share/doc/staden-io-lib/test/data/tag_aux.fa.fai |
| FileSize | 18 |
| MD5 | 7E8FA919CF80797A912221FDEB52F72E |
| SHA-1 | 3279281E00B097CB5BEEAFF16A16D8677047453E |
| SHA-256 | 2544DA2D952D843A2249D697B5F6B29E4563A7018FE3C3A141290CDA973B55B0 |
| SSDEEP | 3:7ItGBUv:7I+2 |
| TLSH |
| Key | Value |
|---|---|
| FileName | ./usr/share/samtools/test/mpileup/ce.fa |
| FileSize | 1060702 |
| MD5 | CFDD101D3D08FC60F60F2AA63A7055D4 |
| SHA-1 | 3CE9646D1B8093AF6268A0693D99D7C4AAA9E3CE |
| SHA-256 | 5ECA163C91918ADA9774080EE2274208155F4D1B2D00700EE950CDD7B269508C |
| SSDEEP | 1536:+DZ9AO9uUGd46kRurlplMNqZssDjs41G8dEWM7SVGxH1mTVfisZt4n2NzW4P95mN:drFdO+qjcl59FwGA1HkC/PF |
| TLSH | T100353BB1A3F47D783396054309FDA3C38CF41D7B4E539A221DE5121B8A34A62E1AE95F |