Key | Value |
---|---|
FileSize | 4106196 |
MD5 | FCD4A5ADD191D19ADDBA0099C2FB9CD7 |
PackageDescription | development files for the HTSlib HTSlib is an implementation of a unified C library for accessing common file formats, such as SAM (Sequence Alignment/Map), CRAM and VCF (Variant Call Format), used for high-throughput sequencing data, and is the core library used by samtools and bcftools. HTSlib only depends on zlib. It is known to be compatible with gcc, g++ and clang. . HTSlib implements a generalized BAM (binary SAM) index, with file extension ‘csi’ (coordinate-sorted index). The HTSlib file reader first looks for the new index and then for the old if the new index is absent. . This package contains development files for the HTSlib: headers, static library, manual pages, etc. . For compatibility with sambamba, the internal routine cram_to_bam was exported, hereto adopting a patch found in guix. |
PackageMaintainer | Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org> |
PackageName | libhts-dev |
PackageSection | libdevel |
PackageVersion | 1.13+ds-2 |
SHA-1 | 39A8D773D1ACBD3E99E0225B293A1C48053AFBF5 |
SHA-256 | 7FA1C233EB8A2E7C69D2E9075B26F0F30FAA3F3C213317662BB3E0CE3490CE87 |
hashlookup:children-total | 36 |
hashlookup:trust | 50 |
The searched file hash includes 36 children files known and seen by metalookup. A sample is included below:
Key | Value |
---|---|
FileName | ./usr/share/doc/packages/htsfile/README |
FileSize | 2680 |
MD5 | 67A6A8C3E155B389BBE5EA3EB83F3CD5 |
SHA-1 | 0D2B6D51133C003266746AB86E09A8979A66177E |
SHA-256 | FA5454BAC8CE68D83BC53978BE939CEE638D6D8EED7639CD08787F6B719A6F53 |
SSDEEP | 48:7YifQNXFNZPjYtcP2/ebboWnoxtMseRvq7v57zPsjahIG3t:EiINVPjKo2W3oZnAS7vJPsOF3t |
TLSH | T1CB51B7A7F35011671BD3018486AE06C6BF6E8508735128C036BEC528571B87BE3397F9 |
Key | Value |
---|---|
FileName | ./usr/include/htslib/faidx.h |
FileSize | 12934 |
MD5 | 858BC49C28731A428B501E9A007EB69A |
SHA-1 | 13C5616ECDFAC54BAFC7DCCE79856CBAD3BC9634 |
SHA-256 | DD91170C7498D92554D6B197616A2776301B9F8896F95875350E174A05B8B177 |
SSDEEP | 192:0NQHnEB3mkePZwrBZoFBW9BZoFb91e3QVEo3rvqKPKRPKJPKXD0u3wVUX+lXUey:0NyEBWrPZ8BZoFw9BZoFBR+X+lXUey |
TLSH | T1E642737BA98A12F7631033D1516E9994A338446E73F4E480B05E74283F5ADFAA4FE7C0 |
Key | Value |
---|---|
FileName | ./usr/lib/powerpc64le-linux-gnu/libhts.a |
FileSize | 5155300 |
MD5 | 7630C0E33142BBF0D599E541C1E47E0B |
SHA-1 | 157283E90C9E7C29AEC6D08A68DA841AADA0CE56 |
SHA-256 | 8119897D16B1F17637F8967DFC499CB35A73FB3BC5EC023F64AAF96C4A1A5ACD |
SSDEEP | 98304:tq+FHNU7D+Tlun1BWsYo84boaMBwDmY2Gqs8hGa8+9o5:tVtED2lu1BgVY7qsoGU9o5 |
TLSH | T11636F18ECF549E66C9B8077614AF4F182BF4C18A6181DB276B28D67C2D533A57F0B0C9 |
Key | Value |
---|---|
FileName | ./usr/include/htslib/kbitset.h |
FileSize | 5605 |
MD5 | CF84C8AC0D1197A3BF11293CA2D19875 |
SHA-1 | 178578D11C1F886602C4E8386E264EF0BD3552C7 |
SHA-256 | 5D5815A98C24884CF2FB8483C5FCC201E7A2F3DDAB0C3A48A6E2704BADD425B4 |
SSDEEP | 96:INPOUwQHn+6hAa/Hfk+dEVGPUoV9YaDJiUKZEsaEBmuBIDq6QlpDo:IEQHn1/HM+HP1DDq6sahn |
TLSH | T1D0C1A947B118D3FB3A9A1AB2114E854BF299377F56C7EF54C85B40B81F0541C52F98B4 |
Key | Value |
---|---|
FileName | ./usr/include/htslib/kstring.h |
FileSize | 11090 |
MD5 | 532459E2E5DEA934E82FD1DC844130C8 |
SHA-1 | 215C9DD83ECBB52972B0AE95F4C5780DC479CDAC |
SHA-256 | D63E98B4C17A679C95B7A84E6158D799D41DEB69AB242EAAF03F8DD4A586AC04 |
SSDEEP | 192:IJQHnYcNPyk5kJAzQuLioblL23ojFpL/5jo0Dd9bKauG07cas:IJyntEKLPlL238FpL/5jXDOau/4x |
TLSH | T1D832E746A96591F37904C73B669FE804A20AF0AB73F6DCE0F45E60E83F0685D53B7981 |
Key | Value |
---|---|
FileName | ./usr/share/doc/tabix/changelog.Debian.gz |
FileSize | 5871 |
MD5 | 5826B0D087767127522E39586DB4D4B8 |
SHA-1 | 24CB13099B844DF1B769D8B74E04BF60E192C223 |
SHA-256 | 4926BC3E0C9A0DEBEF8F1B1EFFD48ED9427244C70CA0FCAB355361E13F50B329 |
SSDEEP | 96:5MILllk4Tw0lnK7LSN7fVxPAVCdAXtzUzh5Q0GoxgCX5sbE8HTiHLAKO/SbOXkmt:57ZGdcnKfM7LiCdqtzUTkoxg48zIO/rr |
TLSH | T17DC18D2C2971902FCC69045DBE687863285F3986DFFDD78C7602B7601A1DF1E7816380 |
Key | Value |
---|---|
FileName | ./usr/include/htslib/khash_str2int.h |
FileSize | 4050 |
MD5 | 163C505B6A47B236C04F9455EE4C493C |
SHA-1 | 277BB828BF436B3286AA0C3E0C19BC3639A3415B |
SHA-256 | 9D317EED7880722916B6C0ABE90C672C8DBC99A119762D62E22C387E236B2541 |
SSDEEP | 96:ymupQHnoJyspjGLwLANLMZZf5tlbWZLJlEL55EMNDaKEqNDMjjP2Tr:uQHnoy4+a9Zf3lbWzl055dawMjjOr |
TLSH | T184814185B9D351124CB00EBE777A2878A60E20AB62FDB550FC5B3A501F46056E3BFDA0 |
Key | Value |
---|---|
FileName | ./usr/include/htslib/bgzf.h |
FileSize | 16081 |
MD5 | 0EB8EA58E56C136B50432EC3AB49C4E1 |
SHA-1 | 2BF8014CEFFFE7C35E2C892A7939D8D42403E58D |
SHA-256 | 3BFDA471DA41A1FE2F3BB57A3EA32967432639E292F4A55D5C2F53EF7B143287 |
SSDEEP | 192:D0QHd6I6dQ9BstC3LBNfEuXV1XFmYrCmFVzghzj8moSzNECZi1BiH5PGoNJy86sJ:D0YUOBplJEyEYxB8qnZp8x5L |
TLSH | T14C7296575DEE497B07605C718F06A5D4E111E22F33A58AD0B52E7B782F4EF24A8F22D0 |
Key | Value |
---|---|
FileName | ./usr/include/htslib/ksort.h |
FileSize | 11480 |
MD5 | 9F7B758259A19A6BE0AC9DE80E1D62DC |
SHA-1 | 30FB9E849FE0877CB4C1B3CA4651BC772A14C5E1 |
SHA-256 | 7047CFC6B5352EC7C6C00ECB21DF92EA14D81AEB7D5B0457246924E0C20BCF60 |
SSDEEP | 192:IMQHngVmlycVlBQQf+nufvN5UrIs0PrkwDMn0HXTd0rm8ZR7:IMygIXNJMW8R7 |
TLSH | T14D323125BF9D312114DE62765B48848D720FE47F9253ACDA3ECC55AB042783C03BEEA9 |
Key | Value |
---|---|
FileName | ./usr/include/htslib/kfunc.h |
FileSize | 2828 |
MD5 | 905AFA0BBFC0CAE217B909AEF543FA93 |
SHA-1 | 321FBF08C748BE808A2C98DBAFCED994EB5479A3 |
SHA-256 | 9DBE4F59DAE695755F6E94E8AF13591A0CD042C917296E9D9F9C43ADC1F2D9CA |
SSDEEP | 48:IbjJcT8JxPPvGUubQH+sZIT983+kFUtSTP0Pr9+3JGoX0GVLZ:I3hPOUwQHn+9tzQG+0Y |
TLSH | T11751D64E79183BB38D5665F155EBB1C8F122A166B6EA958B802FD0C10F128C870BDDB9 |