Result for 4E2B4E388CD871BB8F4C0ABD87D2F10900602CCB

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Children (52)

Query result

Key Value
FileSize2124104
MD56EF09E22BCAEF3DCE56160710E398AE9
PackageDescriptionReference-Assisted Genome Ordering UTility Ragout (Reference-Assisted Genome Ordering UTility) is a tool for chromosome-level scaffolding using multiple references. Given initial assembly fragments (contigs/scaffolds) and one or multiple related references (complete or draft), it produces a chromosome-scale assembly (as a set of scaffolds). . The approach is based on the analysis of genome rearrangements (like inversions or chromosomal translocations) between the input genomes and reconstructing the most parsimonious structure of the target genome. . Ragout now supports both small and large genomes (of mammalian scale and complexity). The assembly of highly polymorphic genomes is currently limited.
PackageMaintainerDebian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
PackageNameragout
PackageSectionscience
PackageVersion2.3-2+b1
SHA-14E2B4E388CD871BB8F4C0ABD87D2F10900602CCB
SHA-2561DF7D63531B709053CA8FC7A0B221809F75CFF22ACA25B100D005C70A1769C45
hashlookup:children-total52
hashlookup:trust50

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Children (Total: 52)

The searched file hash includes 52 children files known and seen by metalookup. A sample is included below:

Key Value
FileName./usr/lib/python3/dist-packages/ragout/tests/data/ecoli.rcp
FileSize94
MD5E91075E392A893553DA230B674927546
SHA-100336796F0A34B8474D6DF1874AA591EBA99B229
SHA-2561BBA6D98B420C4D7926F812E1BAEC6F0EE57C125A6E9CF9E5C7B74F6013CCC5F
SSDEEP3:ELGAWiFVC0Foc5UXF7EfXTQ1mFcsJ5MDE:ELGio0K8DrJ5CE
TLSHT1DEB0112E238822C003C00833C38EF2F28CB00F0A883302E200A003B82B08FB88202882
Key Value
FileName./usr/lib/python3/dist-packages/ragout/main.py
FileSize12162
MD5FD469201F34711D6089AE22EB975CD1D
SHA-1072434E33F04FE95831967ADB64155EC2026BD92
SHA-256205477FAD4071E6E368D31AECD0119D1A2FBD7175BAB5FE7F1DB1E685DB90E26
SSDEEP192:M7N1yOPJsxkvBV4IzwqFMZxmkW/i3Xc+IfzYyUoKZ2lemIEkYQ:MKILp/zeQ1i0fzfUou28Ye
TLSHT188428607482628B647A78458BCBF7B12873966076D0111ACF6DDCB247F8CD2D42F6D6E
Key Value
FileName./usr/lib/python3/dist-packages/ragout/tests/data/mg1655_contigs.fasta
FileSize4644356
MD59FCAEE84C0A8AFD1B80B4F0B80476928
SHA-10C4FF678DF8CF904A7A0855E3162DDA8EFE1CD2F
SHA-256C8263C263924BB8F2AEE0193F97CB2F5EDFCCC8F57D66938803B49584E1E0BCC
SSDEEP24576:qo4T3TSgB8KAlkjms4G5N8Vd92iD5WNpAeGJNfONfa7JpVuSzQrBQNr9Ru9JuJm4:T
TLSHT16A268BB5A7F07D72728705070DADE3C2CCF47C798E17AA222EA5160A4E70D66F07A45E
Key Value
FileName./usr/lib/python3/dist-packages/ragout/tests/data/mg1655.coords
FileSize115133
MD5EFE6BACC6A0C40450483D58578912013
SHA-10F807C7B48AD2D47646BCDEC66BF9F40869FC5C3
SHA-2563B871A0BB9F81FFF096F4A0BDBE95BB0AA6237424AB18867AC1BA7EF1CAEF8F2
SSDEEP1536:/ceDLpyi0qi+MCBA+DW4NneqI27xeBvwelGnvgzL3tNZjEHJeg3j:/ceDly2I+Tet2deKeEeOeg3j
TLSHT12FB3B5D72E9DA982517EE56702EE3102791AD402911F8E9F73CC9EAB4F8D7005BCE478
Key Value
FileName./usr/lib/python3/dist-packages/ragout/tests/test_toy.py
FileSize824
MD501C5E18E8A50C85DC19323879C8F7EB3
SHA-110ABC556224AA89D37082F58431F7CCDDB1C5CE7
SHA-256EE9174A1DE35674E80FB0FE98EB6E91076DACE9B898E67BD43FEB6D19CF9DCA3
SSDEEP24:7V/u7S0JubnrBbJKMgHMOHTI9IpM1VfiGCIypwv:7M7Bc71bngsT9IpM8IyA
TLSHT1E801F1A48D6528704B87C6EAE04650715757E4776F973038F1C84AB0BF2517583F9CBC
Key Value
FileName./usr/lib/python3/dist-packages/ragout/synteny_backend/cactus.py
FileSize3551
MD51BB022FF57315A1AE1F3F1F3C89EBAA1
SHA-1151095E00914BBAB3F20C48D7A2768DB4D0D91B4
SHA-256D9B4395B75DA8B349AC5ABB1A8247D28267124AE9C9A1EE867AC568A195910FF
SSDEEP48:xLmcd96l2hum66yernGDMPsMhPoQCOFdDwD5ZWhK5NAX07O7ihk:Mh2huPGrGYP/hPoQCkdDwD5ZdI0xS
TLSHT12771B5E2DB195CC0479BDA403473C545CA78A66F1B061478BAECE7447FC88A1C3E2D8D
Key Value
FileName./usr/lib/python3/dist-packages/ragout-2.3.egg-info/entry_points.txt
FileSize45
MD5724605CAF9793D55D7D61E64D2E275CF
SHA-115577C760B8A75AAEDF01523677A76B406A97076
SHA-2560E98C7F5F08A095CC16913769392282B51501E055D253D8C234510BC4E4A8EF2
SSDEEP3:1XEJsqLRLIRf43n:1Xez65M
TLSH
Key Value
FileName./usr/lib/python3/dist-packages/ragout/synteny_backend/sibelia.py
FileSize6943
MD5967EB8C4B76DDFF2BCFFB3B6E2048869
SHA-1156BB7D8B3B67E76ABF16073D4B19CD87419F9E5
SHA-2567E869B28B25B44C0EC01791813D5F49973D8EBA541C8B74567927C6F23FDA3C0
SSDEEP96:MKejS94u3fMeBMjZ0w4AM/FDq+TsK1eX6eiQNqPoQ9ASSzbD6TwHwjzC:MK/9LWedAcFVoK1eKedIPYSwDpOC
TLSHT1F7E1A8628472ACE07367D2803E5781536F64E9375A015178FBECA6407F85C2B82FAA5F
Key Value
FileName./usr/lib/python3/dist-packages/ragout-2.3.egg-info/top_level.txt
FileSize201
MD5BB2AE14973B65029D7E9A42398D9C66D
SHA-11758DABB48DBD711CB2B1E199A687E756EBD34F5
SHA-2561386354B318ACE52B9A6F7A192FF9B84B2C2167FB02EF336418A750053AA0058
SSDEEP6:qfyCMG3YNHvajavujDEVHsYW9Ps37jcvUCLs8HsvRAk0Ps2v:qfRHINHvaj9jD0s6LjcvbLs8Hsvmls2v
TLSHT14BD08C42CC0623662A02B94EACAABE01830DA637BCACC1FFC12B4054E8B42C0C762C35
Key Value
FileName./usr/lib/python3/dist-packages/ragout/shared/utils.py
FileSize707
MD534BCE44121F14D3B5FDC4049B9867DB8
SHA-11773590DB8B5597FEB10BF427A99B8D9FE5F6560
SHA-2566A3E3C6F5C22C331ACFDCE3A6DA39FF521A6FD2524B1E1A70912B15487451891
SSDEEP12:ou7XmJuhTjCRjKJXoKe5XhdWSKUvZQV91Cko4bymrckF/KMDZelCcTK:ou7XmJuhT2RMo5P4UvIxH2muoelvu
TLSHT14E012B92D5812D409746E3D84DDE89C17319ED83271D61787CCC0019EFA9E548AF9AD8





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