Key | Value |
---|---|
FileSize | 2828320 |
MD5 | DDD83CC83C1AF9FF521A5A4AAC1860FE |
PackageDescription | structural variant caller for nanopore data NanoSV is a software package that can be used to identify structural genomic variations in long-read sequencing data, such as data produced by Oxford Nanopore Technologies’ MinION, GridION or PromethION instruments, or Pacific Biosciences RSII or Sequel sequencers. NanoSV has been extensively tested using Oxford Nanopore MinION sequencing data. |
PackageMaintainer | Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org> |
PackageName | nanosv |
PackageSection | science |
PackageVersion | 1.2.4+git20190409.c1ae30c-5 |
SHA-1 | 5B691EA00DE1E36C68619F9104C41EE4E4712EC8 |
SHA-256 | 286B195047413270488FF1B8544B105C6EF25A0D616C2E5AAEB782DF59EC7F64 |
hashlookup:children-total | 30 |
hashlookup:trust | 50 |
The searched file hash includes 30 children files known and seen by metalookup. A sample is included below:
Key | Value |
---|---|
FileName | ./usr/lib/python3/dist-packages/nanosv/utils/parse_reads.py |
FileSize | 3480 |
MD5 | 1A2BDA2BDBE703A137FF66DF6F4E9059 |
SHA-1 | 0C689BB7DD5EB12C2DCBCDA952BC0F662A8FDCA5 |
SHA-256 | 6CC0459519D79E186C6290C1A3D88A37369408F44AFCBDAC13F4FC3B00B4E518 |
SSDEEP | 48:EWX9AzuH/7XuBf20ZMo+riHZfAOuyNeTZieTN+OqnDewuziewKzR:Eva/7XuBu0ecZYVVXkJKp51t |
TLSH | T184712683A11798875581A73A792BB0BA26235E76A4805CF432DCF740DF00F5F7F7A5A0 |
Key | Value |
---|---|
FileName | ./usr/lib/python3/dist-packages/nanosv/classes/variant.py |
FileSize | 400 |
MD5 | A13EA2A9F312CAEBD9F8658BC139498B |
SHA-1 | 23BB99917A0889D7A7CBBA0078B334BA86B86F39 |
SHA-256 | 7D45771DD893530E0EDF163AE9929DEE89CD4B84D273CCBF4D5513C47FEEEDB6 |
SSDEEP | 6:DgV0k1ApzFvXKPXSF/ZXHLAhCOAO93Xdy5X4fXq1LLUXYVFUXe93sHnxXHLA/ipr:kJ1ArC+/mAO9I5IqBLOqAe98HWi+9E |
TLSH | T14AE04F51C8665D07500B8863845F6876664D9677231CB13934ADBA8C0F49F91B1A9CB8 |
Key | Value |
---|---|
FileName | ./usr/share/doc/nanosv/README.md.gz |
FileSize | 4371 |
MD5 | DC429467FAB040339516A364BC437705 |
SHA-1 | 2DF3E08BD58A126547538489DD34838061D6FEA5 |
SHA-256 | 0A5C89F7A1C8D6BBEDFAD4E013CF0DFFA65546EF4E946754BC403D174EBCC327 |
SSDEEP | 96:HyTZMf1SaLRNC88QanbPYLfvWgKVDLGs75UrE/a:HyTZMfc22QIbPYTvJUGsM |
TLSH | T1A3916C1071CE9591225B0F0C473E01D6BD4AB635231EE30175FA5ED9CA688AEC11F570 |
Key | Value |
---|---|
FileName | ./usr/bin/NanoSV |
FileSize | 953 |
MD5 | 3DEE92F5E0AA76157E957D09719431E6 |
SHA-1 | 30BC62E614F39CB5BE25991B139366E55CC0C931 |
SHA-256 | 0ADD4762F6295B5EC5CFBA95C75780C8058EC4B11851277EFB5938352F761BFD |
SSDEEP | 24:PudxZvFt9EfLwKLPLwoZZT0EeC0RDaeb5:Gd7p6smsoZZTIael |
TLSH | T13D1199A2A820B72296D18BCE3CB0A1AE021B59E776906026F1DC9FF49FC53118C75F56 |
Key | Value |
---|---|
FileName | ./usr/lib/python3/dist-packages/nanosv/classes/read.py |
FileSize | 351 |
MD5 | 436ECD582E2F3BDEA94305A73726B30F |
SHA-1 | 30BEDC62C4EF9479E69823A50BC3DD64CF877ACE |
SHA-256 | A85F100F05C0A9719AB5C05B29A65B260DAF1D84E4F943339364667460F1F3B4 |
SSDEEP | 6:HWaHwe3W8WCk1AWsFxX4H0XL+MF3XHLAOoJAaddXYrxXHLA/ip5SFfulw10zj:HTPWx1ArGHm6A8dizu0v |
TLSH | T183E086239906A81342335C1B841C6A53F61902733518611234BC79941F79F4695D8CA8 |
Key | Value |
---|---|
FileName | ./usr/lib/python3/dist-packages/nanosv/utils/coverage.py |
FileSize | 1171 |
MD5 | F23F915E20B79CDA5E8760BA6C9A8536 |
SHA-1 | 50C81B4863F78014CDD1F29657C77B079659A307 |
SHA-256 | 689021C38E05ADCA9FD0E090AB81E9891CAEE7E6A05263880250B001AD4EE7E8 |
SSDEEP | 12:HRV22yHBkORD9+qrKoH+ELUt7bJHKJV3q2H2io1oF1lEiFlCKg2H2EcoboFR5y8/:xTqX9oolwiq+1lXtPUzAtJ6L |
TLSH | T121219E05D0610E556787405DFF89D05E6FE1159BD53936B43CEC4D2CCBA861C50A28AE |
Key | Value |
---|---|
FileName | ./usr/lib/python3/dist-packages/nanosv/config.ini |
FileSize | 3046 |
MD5 | 16748AA6F1871163C9E5BB2F17986E33 |
SHA-1 | 557687319DD4B783761F383114503A29B9D5E5C8 |
SHA-256 | 912B88436D7A4F60BE1FE89409F4A884FA208AA7AFE24B3DFA4A1ACF3B92B8E8 |
SSDEEP | 48:xyMe3newF6xe3DeJSecynfYG46N7HtLgw7TYKQoeojvM4dW+iekyyMtBfpEP7NZ:0uwR3S/cynH46N7NJ7TrSCFdW+fkYn+X |
TLSH | T13251830623791357AA726253B82FA3E5ABFC80F1B3E5921478E0820CFB03DB5967B554 |
Key | Value |
---|---|
FileName | ./usr/lib/python3/dist-packages/nanosv/utils/parse_breakpoints.py |
FileSize | 6276 |
MD5 | 0EA422D1D565AC2B1CCA2FF2C811DEB3 |
SHA-1 | 594ED58CA7D8582D9019635E88BA4BFC200E58CB |
SHA-256 | A808E6A5DE1606A19E612A4739892A54196CC7228F9EFCB3827EA88E9365FFA8 |
SSDEEP | 192:UQAB/JPeisiRiGiWixi3iSpgieiXiuiEiFiOi3i/iLLX:UQS/pdv |
TLSH | T1FCD1CC17C43184C35142A5BB555BB07D279779B7A8806AB8F2BCEB540F21F22BF384B6 |
Key | Value |
---|---|
FileName | ./usr/share/doc/python3-cigar/README.test |
FileSize | 437 |
MD5 | 700F57B9D0187CC3156D3798D5EA2545 |
SHA-1 | 66358FA8C8F64E5C8B32FF8E53B9E78FDA1B90CB |
SHA-256 | F245519E8DE3A727A8D485C6462007C1C21EA96459B2DE6B2540C3BAA9794FD8 |
SSDEEP | 6:OpK+2NHlGq7vlGkwyAK9EOMfyGYL6PCKGQDVRX:x+q8q70aNMvY2PJGsVB |
TLSH | T182E0A7761296550B3214CC9F1ACAC271E41DF02D73340180797C351D57CDD374993CB4 |
Key | Value |
---|---|
FileName | ./usr/lib/python3/dist-packages/nanosv/utils/parse_bam.py |
FileSize | 22901 |
MD5 | DF29E4A6DF0BDE5CDD702C243966D78C |
SHA-1 | 6C1095F109802F30E070B7CC9F47030ECAC563F4 |
SHA-256 | 2B4C63CA09C27F7E139199ADCE83A1C7E2C727E0A8288DC305E864AC67B3DB14 |
SSDEEP | 384:NlI6z6ey4COgy2pbm7eAzES0gECt8OiD7Xe:Nl9z6ey4COgRbSJzagU/Xe |
TLSH | T1B5A2210594510593E223085F868EC2AB27797C7321180838BDEDB7AC1FD6F7962F9AF5 |