Result for 5F8672043DF62345F83D1A0F8A6A6898B0DE243A

Query result

Key	Value
FileSize	208656
MD5	4E9B1D44F61A75A05FA23E50E9ADDF14
PackageDescription	functions broadly useful for viral amplicon-based sequencing iVar is a computational package that contains functions broadly useful for viral amplicon-based sequencing. Additional tools for metagenomic sequencing are actively being incorporated into iVar. While each of these functions can be accomplished using existing tools, iVar contains an intersection of functionality from multiple tools that are required to call iSNVs and consensus sequences from viral sequencing data across multiple replicates. iVar provided the following functions: . 1. trimming of primers and low-quality bases, 2. consensus calling, 3. variant calling - both iSNVs and insertions/deletions, and 4. identifying mismatches to primer sequences and excluding the corresponding reads from alignment files.
PackageMaintainer	Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
PackageName	ivar
PackageSection	science
PackageVersion	1.3.1+dfsg-1
SHA-1	5F8672043DF62345F83D1A0F8A6A6898B0DE243A
SHA-256	2FE32137A0CAC79DA404F125DF23C5E923BFF54CC4B77D1275512AA273D48782
hashlookup:children-total	50
hashlookup:trust	50

Network graph view

Children (Total: 50)

The searched file hash includes 50 children files known and seen by metalookup. A sample is included below:

Key	Value
FileName	./usr/share/doc/ivar/COOKBOOK.md
FileSize	1592
MD5	04B412F133D6D7882CFB90516EC739E7
SHA-1	069A5FED16B044E6CB60AE589AD21C2341DBB0F7
SHA-256	706CDD31676834A080BB71BF8E7E2C69314319CA6AE600141E81153CA740FEC9
SSDEEP	24:+FP0wV6xk+xUQ80Ha+G0HhMm8uh1k8G0fPWFIrMGFj8+c6fGOt04hxHJu1DDv+hf:0fM6+t55JuIY+TZfpE+hDMeepE+K
TLSH	T1BD3158FB9C1D09C70F8125D451D53269C217967EF8D8842AC0F46F04644476B3AF77A9

Key	Value
FileName	./usr/share/doc/ivar/changelog.Debian.gz
FileSize	842
MD5	282A44054CC74163742951B1B938F514
SHA-1	07F063244958DD92A5B853CB5C26592D30F123AE
SHA-256	3DCCED15DBC23D1D98EA094F0D714284F0E84C4D96959433D5F05F53163BC6A4
SSDEEP	24:Xvpv82rLmBcqk4IQggcC09rQEQPyz6nyv1+UJZOvuE8y:XvpFL61ggcBpQEQKzQK1+MYvuEr
TLSH	T18C01867082AC76695FBF497018418D17B47D84C4A3B0D7B64D4464478E97F16C7890AD

Key	Value
FileName	./usr/share/doc/ivar/examples/data/test.gap.sorted.bam.bai
FileSize	96
MD5	45D4E161F99A3366FDE26E5F8EA11B7A
SHA-1	0CFA671086A51F2FEDC9F622739C73BDAB2F5B47
SHA-256	006089F2B633D67CA66AE112B7A5D40716B9316B5DC81A37D89FF0D189ECAB44
SSDEEP	3:ltPllzltlz2lVHll72l5ll+lz:bPr1KS2
TLSH

Key	Value
FileName	./usr/share/doc/ivar/examples/data/trim_isize.bam
FileSize	1043
MD5	3070297661725A46926F17C9F4BD4098
SHA-1	104A26A3E2D0D4BAC92F1EF23AE88BC2930FBBA6
SHA-256	EC56227E52099AE474EF7FC28897CCE5D6020375E649FC5C18DEFA792D7E8946
SSDEEP	24:XmjttZAW8BaaZd/zJZMXKozBZPTUkorfXLE+xUIM+:XmepBa8/zqDNhTuDLEzh+
TLSH	T1F611B562D9B81879FC2CCBB63B4C1895F27956EC11E82138EB8261395C91100A3CA03D

Key	Value
FileName	./usr/share/doc/ivar/examples/data/test.trimmed.sorted.bam.bai
FileSize	96
MD5	3E94952A4D11306FA9807826E8AA7139
SHA-1	1E33EF57DCD04A9CAD2F85F6139D41141D9A503E
SHA-256	AA2CB9013D36BFBDEB7FF1C6A99F734CD73E9EF7D215D917FDD085ED6E270103
SSDEEP	3:ltPllzltl0MlvHllMMlIlUl0:bPr1HpO8
TLSH

Key	Value
FileName	./usr/share/doc/ivar/examples/ref/out-trim2.sam
FileSize	828
MD5	12F30C803FE86675978F66EB422B685A
SHA-1	1F1A6383E82F430C89602F570630695348CDF2E4
SHA-256	3D04BB3C7ACE5FBAA291E166510DBBFA86D470E49CEBB507B8E87A4B1D8A5E86
SSDEEP	24:kaBediIHEmHyxQLUZjytZvsZaqtDdXPoRUwhxmMizvsB:ks6VknQC+ZUZ/B/shx3izUB
TLSH	T13701C271BBD5AE75A1D20643479F3752CCC168BD4FCFC921276116152D74152F076513

Key	Value
FileName	./usr/share/doc/ivar/examples/data/test.gap.sorted.mpileup
FileSize	6002
MD5	78DE089598FFD727ED95C1525FCB6498
SHA-1	2F1DF2A5A9961155B029D50298304ADB23CEEA3F
SHA-256	A5509BFF62961FE6F47B7DD7A48EF0F6E2EDBB9722AC3B738D74546892CE08E3
SSDEEP	96:k6g8ZsGIbLHRWh0rmiTfdPsdL3oJGhgQsMtBvjFpfYOT/8gb991iyFnAwumf2:k6g6wT6dL4SgQsMtBbffZ91iyFnAwu+2
TLSH	T187C1D02239D36741923C924913E4BF8D668BF699607B4F4C7BC8F2D5FA02FB04694663

Key	Value
FileName	./usr/share/doc/ncbi-epcr/README.test
FileSize	278
MD5	2DE4573BC735E689F789D7662AB0497B
SHA-1	34200C528591A6F25552E67122DAA479F2C54753
SHA-256	661779DB6A77C9045E836BDFEBA7DFEC1A17CAF079E40B27E6E0C22242CB4312
SSDEEP	3:OpKL62NMGlGmIRCvH7xd7777777777777777777777777777777777777TjvvlGr:OpK+2NHlGq7vlGkwyAK9EOMfyGYL6f
TLSH	T1C8D0223712C688063100CC8E19898131E41DB02E723800C02928391C97CC8324943CB8

Key	Value
FileName	./usr/share/doc/ivar/examples/data/test.sorted.bam.bai
FileSize	96
MD5	D2F49628DEC9BEFCA95DF0A58DC3EF5C
SHA-1	3910EF2196B719A2800ED7CFE1734847B45F5853
SHA-256	DAD6CFDB517ED15BE02DC7310853F50AF78AD9F9603C4B9C2131E294215DB4C6
SSDEEP	3:ltPllzltlLlv/lv3lHllTlv/ljl1+lLl:bPr1Y
TLSH

Key	Value
FileName	./usr/share/doc/ivar/examples/data/test.sim.merged.sorted.bam
FileSize	822
MD5	510957818C8FE0E3F2E8325A5BB77C6C
SHA-1	41FF7B2B57D11D281989B4A789CA6C233DDED158
SHA-256	C482C60C8304EB09DACEB0A1CC36ABC86924FFEE625EC89A55FD03B227A95DFC
SSDEEP	24:XmpQL8kUaSi+jkrdjxaWM5VjaebFyUYXKncHVF4jld:XmpQL8CN+jkRjxaWMPaeboUI1S
TLSH	T15B0186F1F2469559EF81C334A7B96C47FA20512EAF15F306058399184A7468808C00BB