Key | Value |
---|---|
FileSize | 836802 |
MD5 | CF32787EC6BF1C0CCC8CACD500423B73 |
PackageDescription | programs for maniuplating DNA sequencing files The io_lib from the Staden package is a library of file reading and writing code to provide a general purpose trace file (and Experiment File) reading interface. It has been compiled and tested on a variety of unix systems, MacOSĀ X and MS Windows. . This package contains the programs that are distributed with the Staden io_lib for manipulating and converting sequencing data files, and in particular files to maniuplate short reads generated by second and third generation sequencers and stored in SRF format. . This package contains example data and a test suite to test the data. |
PackageMaintainer | Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org> |
PackageName | staden-io-lib-examples |
PackageSection | science |
PackageVersion | 1.13.7-1 |
SHA-1 | 709FCCB73E7260D8D17ED7DD9C69806C18231914 |
SHA-256 | 5A051802F313D9F1F351C65997B109BD1CCA71612D2ECC88DC72C8B56DEDE54E |
hashlookup:children-total | 74 |
hashlookup:trust | 50 |
The searched file hash includes 74 children files known and seen by metalookup. A sample is included below:
Key | Value |
---|---|
FileName | ./usr/share/doc/staden-io-lib/test/data/tag_aux#special.sam |
FileSize | 596 |
MD5 | 967CC6EC391ED63073533C89D0EF8E3A |
SHA-1 | 03B14BDAE116EAAC501D45120B98E607548CCFB3 |
SHA-256 | 935AD31FA6E743F16F3265FDEAB6B636DE4BCE590D8CC0AA8C454B9B9A6F6E08 |
SSDEEP | 12:vY2lqZNEE86nQw+08vG4uYkPsBm5zn1SWft3qang+08vG4uYkPsBm5RhNSWf1:zmNEEPQLf/uKBmzn1Tt3qan7f/uKBmRl |
TLSH | T1F6F0ACA9225033F48E4682CE37A131EBA84A0C4D171BBB8C3108D8DD26E4C0BE420558 |
Key | Value |
---|---|
FileName | ./usr/share/doc/staden-io-lib/test/data/c1#clip.sam |
FileSize | 337 |
MD5 | 85FE4FD282E64ADB93B5B7789F2632F0 |
SHA-1 | 06FC71F18C86EE0B3C2D0FB8DD8B7A5605A1C60C |
SHA-256 | F522DE0896725DD706BED7F13E50B51747BDA1CF1819C87B9B754262851186AB |
SSDEEP | 6:hAc050o3MU108N0l3/un9o3GxvYAMsPHPjVA9o3/jV94Un3icV9HkE/f:hnSl1PON6YqvJrvJ/y89EA |
TLSH | T14AE042102F941CA2790D68504E46C8FB99EE110CBD8D19A4DAA8F3003F9DBC06576CAF |
Key | Value |
---|---|
FileName | ./usr/share/doc/staden-io-lib/test/data/both.run/4_ILLUMINA_GA_MATRIX_FWD.txt |
FileSize | 150 |
MD5 | 1893D9532F6DEE14E2B2CF42AF030C9F |
SHA-1 | 0916D7695193E53DEF7BA77EB1276BDFF5E370B3 |
SHA-256 | 4F33295FD8A0F029848C9F4685B9ACE149880967BAA03A454F2C5921EAC83CA3 |
SSDEEP | 3:SZpW5XAUQumW5Ahcv8wvbFevLATGcLZpLgFoL//EVVLVVvhLYvn:SZpWjx8wZwWJ4GL3+lCn |
TLSH | T158C02BEA0FC34D9C550F1C5C84038D800312D04133D25D8F12DC227DC5300051614043 |
Key | Value |
---|---|
FileName | ./usr/share/doc/staden-io-lib/test/data/both.run/s_4_0133_sig2.txt.gz |
FileSize | 7283 |
MD5 | 7066AADAAE06FA65560CB5AABD0A16CF |
SHA-1 | 0C0A239FBB17909E3E0F464527B9C7685D66DDD6 |
SHA-256 | C50FE5B9913F96C87F93274B23AE77516C591822CD00A47448209DA413158B46 |
SSDEEP | 192:silxIyZY/Ri2vj1BA4UsO7T946/laPvsPUWHWq:FIho27+ld/7UW2q |
TLSH | T1F1E1AF605C23E796F2AD7037893EF352541F51546D8373FA0A234F13294735E7879582 |
Key | Value |
---|---|
FileName | ./usr/share/doc/staden-io-lib/test/data/both.run/s_4_0133_int.txt.gz |
FileSize | 7603 |
MD5 | A5F00E6832A89E8973736DB6E6EFFCCD |
SHA-1 | 0E1907905F93AF431B81D29730B2A8E64021799F |
SHA-256 | 6DE4B9E66FB8BCE914C844B439DC0638C2769EE73B02A60FC325DF37B44BD865 |
SSDEEP | 192:asVIrOa9rP+1f9dkiPdclXykmdLuADEY9jUmpULZiH:3VgOa41fbnPdwX0dL6Y9jUgcZy |
TLSH | T1B5F1BEB490026086BE3552AFD47EC227E789AC4AC92D94383E1DD4C9BD94142EEDD1E0 |
Key | Value |
---|---|
FileName | ./usr/share/htslib-test/c1#pad3.sam |
FileSize | 665 |
MD5 | F765199250CABEA6204DD784C06E69AB |
SHA-1 | 0F301695BD55C929A170C2A76644F29AFD9E2299 |
SHA-256 | 719FF6BF5B7A4D2552AEFCA0E1673182C4F9D299051F386C35B687D8A39833FB |
SSDEEP | 12:hs8EapTj0g0Kq02HnlZwKIcjVuJcpH900St:hKa9x4PHnlSKIcjVuJcpd/St |
TLSH | T1B3011C761D4B4C353D296E124E52D6FB55AC1C98BBCC22D58850DB1A3B91BA088F0C5E |
Key | Value |
---|---|
FileName | ./usr/share/doc/staden-io-lib/test/data/ce#2.sam |
FileSize | 672 |
MD5 | BF8BDE59C456F2C923414C6DFD8365AC |
SHA-1 | 166330E8E6C16C323D10632CF6F671B0F33D09C7 |
SHA-256 | 825FE077D3E4A00B12DE5DDB258AB6282BAD1DA32AA854D6E0BECF44DEAF0F87 |
SSDEEP | 12:hHCMHFgmIggggggggggBO5poWC/feA0fA4Ef8Cgo3gggggggggggpk9cdUNK4v:h1iTggggggggggBO7ol/fVmA4EECgo3D |
TLSH | T157015EF1F86478B9A3772C0D1A51A7EC886D1B192CC33443B5DFB00C86410471EE8DB9 |
Key | Value |
---|---|
FileName | ./usr/lib/R/site-library/Rhtslib/testdata/xx#rg.sam |
FileSize | 517 |
MD5 | 2D298FB75099FBF0C1EDA326536DF856 |
SHA-1 | 17346AFCDECA5C01A6650F01758E4947203276D4 |
SHA-256 | 82E3B5CFB195203366B212FF2FBAB9E25E66D090938ABE2EB238476E49AFBEE0 |
SSDEEP | 12:tXFOsKLF0N6DKvo8XTQi05MYu5FEnr8hr8Hr/:lFhWE6DhmQiy6FXa7 |
TLSH | T115F0A7BA3DA5BC657B827A795BF248F92C6C861F595D2F00C9C0F3222ACFD8DC824005 |
Key | Value |
---|---|
FileName | ./usr/share/doc/staden-io-lib/test/data/ce#1.sam |
FileSize | 355 |
MD5 | D6B256B1F63932B94433032CACCF0E77 |
SHA-1 | 181A60DBDD7F59364225137039F079416E566F5E |
SHA-256 | 73D780AF03B352704DFF5548F7B9105BF29D30724C121EF6AEA26074FB6F45D0 |
SSDEEP | 6:homCVFUKcFgmgUyWp+xuxuxysggggggggggBOgSfWcoWQgH4sk6MF0fV:hHCMHFgmIggggggggggBO5poW34F6c0t |
TLSH | T176E017B1FC9835B4E3A70C0E0A205BE848690B191CC37083B9EFB01C825204B0EA9DB9 |
Key | Value |
---|---|
FileName | ./usr/share/doc/staden-io-lib/test/data/both.run/4_PROGRAM_ID.txt |
FileSize | 18 |
MD5 | 5FFD54A1587C2DEAB6FF439DA37EB720 |
SHA-1 | 183048686C009DCFB05D2F8101FF2D4A2DB13DB8 |
SHA-256 | D66A41333DD24EB0A834E6AC4E1CE3B31E00BF4A726A00D867CE172BC0DD2399 |
SSDEEP | 3:IexL4LUXn:Ic6UX |
TLSH |