Key | Value |
---|---|
FileSize | 3013348 |
MD5 | 8B566BBF384FCACB33E1663FD6D74830 |
PackageDescription | structural variant caller for nanopore data NanoSV is a software package that can be used to identify structural genomic variations in long-read sequencing data, such as data produced by Oxford Nanopore Technologies’ MinION, GridION or PromethION instruments, or Pacific Biosciences RSII or Sequel sequencers. NanoSV has been extensively tested using Oxford Nanopore MinION sequencing data. |
PackageMaintainer | Ubuntu Developers <ubuntu-devel-discuss@lists.ubuntu.com> |
PackageName | nanosv |
PackageSection | science |
PackageVersion | 1.2.4+git20190409.c1ae30c-2 |
SHA-1 | A4F3C8F533D79940A8F2707A273C26536159398F |
SHA-256 | 7DF400670D197C0B94B18ED7F3EA2C747DC52DF7859311CE9E8D36A4EC1A2A1C |
hashlookup:children-total | 27 |
hashlookup:trust | 50 |
The searched file hash includes 27 children files known and seen by metalookup. A sample is included below:
Key | Value |
---|---|
FileName | ./usr/lib/python3/dist-packages/nanosv/utils/parse_reads.py |
FileSize | 3480 |
MD5 | 1A2BDA2BDBE703A137FF66DF6F4E9059 |
SHA-1 | 0C689BB7DD5EB12C2DCBCDA952BC0F662A8FDCA5 |
SHA-256 | 6CC0459519D79E186C6290C1A3D88A37369408F44AFCBDAC13F4FC3B00B4E518 |
SSDEEP | 48:EWX9AzuH/7XuBf20ZMo+riHZfAOuyNeTZieTN+OqnDewuziewKzR:Eva/7XuBu0ecZYVVXkJKp51t |
TLSH | T184712683A11798875581A73A792BB0BA26235E76A4805CF432DCF740DF00F5F7F7A5A0 |
Key | Value |
---|---|
FileName | ./usr/lib/python3/dist-packages/nanosv/classes/variant.py |
FileSize | 400 |
MD5 | A13EA2A9F312CAEBD9F8658BC139498B |
SHA-1 | 23BB99917A0889D7A7CBBA0078B334BA86B86F39 |
SHA-256 | 7D45771DD893530E0EDF163AE9929DEE89CD4B84D273CCBF4D5513C47FEEEDB6 |
SSDEEP | 6:DgV0k1ApzFvXKPXSF/ZXHLAhCOAO93Xdy5X4fXq1LLUXYVFUXe93sHnxXHLA/ipr:kJ1ArC+/mAO9I5IqBLOqAe98HWi+9E |
TLSH | T14AE04F51C8665D07500B8863845F6876664D9677231CB13934ADBA8C0F49F91B1A9CB8 |
Key | Value |
---|---|
FileName | ./usr/share/doc/nanosv/copyright |
FileSize | 1377 |
MD5 | 2FFA370A40C1B834969FB7197CFB2934 |
SHA-1 | 255634DEBA084E71F4737E11E5CD3E224FCDCCEE |
SHA-256 | 48F0CDA676F8BB44814833C4CAEBE8E921F568391E4699AF37C70DF2BE0B7AF1 |
SSDEEP | 24:gtt6O+gPrOJH5H0FIP3gtCZHc1h79QHlQsUu8Ok4UxdjNo3Fqvqy2FD:zOdPKJR7vECyxQHlQshILXj23wn2FD |
TLSH | T1AA21D85A779407762E8F33E0A96858C5F337614BB63F5784946EF240632E06C80F7454 |
Key | Value |
---|---|
FileName | ./usr/lib/python3/dist-packages/nanosv/classes/read.py |
FileSize | 351 |
MD5 | 436ECD582E2F3BDEA94305A73726B30F |
SHA-1 | 30BEDC62C4EF9479E69823A50BC3DD64CF877ACE |
SHA-256 | A85F100F05C0A9719AB5C05B29A65B260DAF1D84E4F943339364667460F1F3B4 |
SSDEEP | 6:HWaHwe3W8WCk1AWsFxX4H0XL+MF3XHLAOoJAaddXYrxXHLA/ip5SFfulw10zj:HTPWx1ArGHm6A8dizu0v |
TLSH | T183E086239906A81342335C1B841C6A53F61902733518611234BC79941F79F4695D8CA8 |
Key | Value |
---|---|
FileName | ./usr/lib/python3/dist-packages/nanosv/utils/coverage.py |
FileSize | 1171 |
MD5 | F23F915E20B79CDA5E8760BA6C9A8536 |
SHA-1 | 50C81B4863F78014CDD1F29657C77B079659A307 |
SHA-256 | 689021C38E05ADCA9FD0E090AB81E9891CAEE7E6A05263880250B001AD4EE7E8 |
SSDEEP | 12:HRV22yHBkORD9+qrKoH+ELUt7bJHKJV3q2H2io1oF1lEiFlCKg2H2EcoboFR5y8/:xTqX9oolwiq+1lXtPUzAtJ6L |
TLSH | T121219E05D0610E556787405DFF89D05E6FE1159BD53936B43CEC4D2CCBA861C50A28AE |
Key | Value |
---|---|
FileName | ./usr/lib/python3/dist-packages/nanosv/config.ini |
FileSize | 3046 |
MD5 | 16748AA6F1871163C9E5BB2F17986E33 |
SHA-1 | 557687319DD4B783761F383114503A29B9D5E5C8 |
SHA-256 | 912B88436D7A4F60BE1FE89409F4A884FA208AA7AFE24B3DFA4A1ACF3B92B8E8 |
SSDEEP | 48:xyMe3newF6xe3DeJSecynfYG46N7HtLgw7TYKQoeojvM4dW+iekyyMtBfpEP7NZ:0uwR3S/cynH46N7NJ7TrSCFdW+fkYn+X |
TLSH | T13251830623791357AA726253B82FA3E5ABFC80F1B3E5921478E0820CFB03DB5967B554 |
Key | Value |
---|---|
FileName | ./usr/lib/python3/dist-packages/nanosv/utils/parse_breakpoints.py |
FileSize | 6276 |
MD5 | 0EA422D1D565AC2B1CCA2FF2C811DEB3 |
SHA-1 | 594ED58CA7D8582D9019635E88BA4BFC200E58CB |
SHA-256 | A808E6A5DE1606A19E612A4739892A54196CC7228F9EFCB3827EA88E9365FFA8 |
SSDEEP | 192:UQAB/JPeisiRiGiWixi3iSpgieiXiuiEiFiOi3i/iLLX:UQS/pdv |
TLSH | T1FCD1CC17C43184C35142A5BB555BB07D279779B7A8806AB8F2BCEB540F21F22BF384B6 |
Key | Value |
---|---|
FileName | ./usr/lib/python3/dist-packages/nanosv/utils/parse_bam.py |
FileSize | 22901 |
MD5 | DF29E4A6DF0BDE5CDD702C243966D78C |
SHA-1 | 6C1095F109802F30E070B7CC9F47030ECAC563F4 |
SHA-256 | 2B4C63CA09C27F7E139199ADCE83A1C7E2C727E0A8288DC305E864AC67B3DB14 |
SSDEEP | 384:NlI6z6ey4COgy2pbm7eAzES0gECt8OiD7Xe:Nl9z6ey4COgRbSJzagU/Xe |
TLSH | T1B5A2210594510593E223085F868EC2AB27797C7321180838BDEDB7AC1FD6F7962F9AF5 |
Key | Value |
---|---|
FileName | ./usr/lib/python3/dist-packages/nanosv/utils/create_vcf.py |
FileSize | 6565 |
MD5 | 9CCAAADDA8DEA41D5266D71875C54E4C |
SHA-1 | 74E4F3BDFBDA28FD36EEE386DD55802C4B91B521 |
SHA-256 | 63C746D21801FEECE762CB0D6B728BC13C1218249AB9080401C1524E7920602A |
SSDEEP | 96:PW5QcaukWFaxidkmBfvtJcDULklte+C2IGeefGOycYmy4Ct7SbGj:PsOxAb5v/cDUL/+CI7fx/C |
TLSH | T186D1FF46A4619D23314FA21DE90B6D922F2950631BD4D46A389C982D2FCFEDDD0B22B9 |
Key | Value |
---|---|
FileName | ./usr/lib/python3/dist-packages/NanoSV-1.2.4.egg-info/top_level.txt |
FileSize | 7 |
MD5 | EED6C8ED7355B5DC550CAC5533BCF609 |
SHA-1 | 7CE68533849917C242FCEDEB652C02ADE61B9AF8 |
SHA-256 | DA3B9896739E4300C652A9ED55F3BBF8A395BD3A29FB059FC7D60AE04C40EBDE |
SSDEEP | 3:iv:iv |
TLSH |