| Key | Value |
|---|---|
| FileSize | 785980 |
| MD5 | 8C8D970C42AF9EF6ABF186289C74E410 |
| PackageDescription | programs for maniuplating DNA sequencing files (usage examples) The io_lib from the Staden package is a library of file reading and writing code to provide a general purpose trace file (and Experiment File) reading interface. It has been compiled and tested on a variety of unix systems, MacOS X and MS Windows. . This package contains the programs that are distributed with the Staden io_lib for manipulating and converting sequencing data files, and in particular files to maniuplate short reads generated by second and third generation sequencers and stored in SRF format. . This package contains example data and a test suite to test the data. |
| PackageMaintainer | Ubuntu Developers <ubuntu-devel-discuss@lists.ubuntu.com> |
| PackageName | staden-io-lib-examples |
| PackageSection | science |
| PackageVersion | 1.14.9-4 |
| SHA-1 | AD96BEE0DA0999250880FE51B1D711A6724A1633 |
| SHA-256 | 0446605DE718EA63DC3AB3B806035BA978061338529A2734FEEC4C9D37FCE601 |
| hashlookup:children-total | 87 |
| hashlookup:trust | 50 |
The searched file hash includes 87 children files known and seen by metalookup. A sample is included below:
| Key | Value |
|---|---|
| FileName | ./usr/share/doc/staden-io-lib/test/data/ce#unmap1.sam |
| FileSize | 2877 |
| MD5 | EF8FA03CF6BFB29100250A721C5CEAD3 |
| SHA-1 | 010496132990D2154B2C4D684574CCB7AB6F3DBC |
| SHA-256 | 7B6A7272C2B20B745BB35BE971D5634F3F9007EED26F1229668C03A3723A4E3D |
| SSDEEP | 48:dBvmnSDePUfGtrlT8P3Toxd1u2MYTSKBiaRTo0AT0WTG6B7Q8TSLhlT8kVOYT5:dBmnSDePUutrd8LoN91lUaBo0K0UGgQf |
| TLSH | T1CE5157B0EFA21FF09396040A065A67A64DFC38374E8BC1610DDD20155FA0A46FA7B08E |
| Key | Value |
|---|---|
| FileName | ./usr/share/doc/staden-io-lib/test/data/ce#5.sam |
| FileSize | 1937 |
| MD5 | BAEA5F343AA728BDBCE9B232D248E2F8 |
| SHA-1 | 01ED9B63FE26D7F4394411CD85501A3ED0DAF81B |
| SHA-256 | 7FAD196FD4B200EEC253FD572C14E2AB3851F33C5641DCBE84BB1BCC6508B586 |
| SSDEEP | 48:hqmwuoJfM7vuoJfM77xuoJfM7xuoJfM7CuoJfM7F9w/I5IRZ:UmToJC2oJCgoJCkoJCJoJCzb5If |
| TLSH | T126416BB5F89578B8A3A71C1E1A215BE849691F091CC3B443BAEFB01DC55118B0EE9CBD |
| Key | Value |
|---|---|
| FileName | ./usr/share/doc/staden-io-lib/test/data/tag_aux#special.sam |
| FileSize | 596 |
| MD5 | 967CC6EC391ED63073533C89D0EF8E3A |
| SHA-1 | 03B14BDAE116EAAC501D45120B98E607548CCFB3 |
| SHA-256 | 935AD31FA6E743F16F3265FDEAB6B636DE4BCE590D8CC0AA8C454B9B9A6F6E08 |
| SSDEEP | 12:vY2lqZNEE86nQw+08vG4uYkPsBm5zn1SWft3qang+08vG4uYkPsBm5RhNSWf1:zmNEEPQLf/uKBmzn1Tt3qan7f/uKBmRl |
| TLSH | T1F6F0ACA9225033F48E4682CE37A131EBA84A0C4D171BBB8C3108D8DD26E4C0BE420558 |
| Key | Value |
|---|---|
| FileName | ./usr/share/doc/staden-io-lib/test/compare_sam.pl |
| FileSize | 3201 |
| MD5 | 613CC21EA3E7FA407A0E86C990A3EEB1 |
| SHA-1 | 047FBFE1368A8F3E9AA1AD268E101F142056AAC1 |
| SHA-256 | A953D033524265D2E654925414DF443E282C9EAAB73F9B685C04B8B90E89FCF9 |
| SSDEEP | 96:VHCdNq8h+c/d+nwL5/HfX55GeawIcV856H1585F5MN5g8hm0JpQuNrwlgEN:VHCvqxc/QnKie8Czhm6btw3N |
| TLSH | T1FD610F0621FA0E1962F3D0291FEDC25ED4A4449F1992EF163C6C15973FD06F89AF5660 |
| Key | Value |
|---|---|
| FileName | ./usr/share/doc/staden-io-lib/test/data/xx#triplet.sam |
| FileSize | 267 |
| MD5 | 58ECC2BF6A3A0A3FAFE3A79C7F3B7557 |
| SHA-1 | 05A52F636958D00913EADCD0A1E282B6181EDE0B |
| SHA-256 | 47D5EA0925D52B4A3C4038DD7571FAA1314F829A8F6FD5DFD214762E88B2D712 |
| SSDEEP | 3:Vs2LEFqvscL2hsOzsKkkttkkksXPPPPves1C5Fskkkt3aP33PPPPPvh+osw2xu3Z:hGcEzKk9kkkwP33Yogu33PFbFiiP333 |
| TLSH | T1FED0C97A33946D961A82980087B315D11C7C12CB0A039F11C1C0F363371EDAABD68408 |
| Key | Value |
|---|---|
| FileName | ./usr/share/doc/staden-io-lib/test/data/xx#large_aux_java.cram.gz |
| FileSize | 13997 |
| MD5 | 35F02417555699CC3C381B0797294CEB |
| SHA-1 | 05DCF041C1A19628A0E0831C969C0F855A399CFA |
| SHA-256 | C5C6C2BD16A01D25A259ECCA52B855AC171B8CDD55EC3722C95AE63B02BD7293 |
| SSDEEP | 384:VP5TnZNj6g7LnM90m/WPkOHrCKvj6s5Edh+:l5lPvnM6NrCKb5Ev+ |
| TLSH | T16352BFB5AB8C6F9874153C6FF4E0976A54F56CD9BAC3A8DAE2DF582500416CC0C8D473 |
| Key | Value |
|---|---|
| FileName | ./usr/share/doc/staden-io-lib/test/data/c1#clip.sam |
| FileSize | 337 |
| MD5 | 85FE4FD282E64ADB93B5B7789F2632F0 |
| SHA-1 | 06FC71F18C86EE0B3C2D0FB8DD8B7A5605A1C60C |
| SHA-256 | F522DE0896725DD706BED7F13E50B51747BDA1CF1819C87B9B754262851186AB |
| SSDEEP | 6:hAc050o3MU108N0l3/un9o3GxvYAMsPHPjVA9o3/jV94Un3icV9HkE/f:hnSl1PON6YqvJrvJ/y89EA |
| TLSH | T14AE042102F941CA2790D68504E46C8FB99EE110CBD8D19A4DAA8F3003F9DBC06576CAF |
| Key | Value |
|---|---|
| FileName | ./usr/share/doc/staden-io-lib/test/data/both.run/4_ILLUMINA_GA_MATRIX_FWD.txt |
| FileSize | 150 |
| MD5 | 1893D9532F6DEE14E2B2CF42AF030C9F |
| SHA-1 | 0916D7695193E53DEF7BA77EB1276BDFF5E370B3 |
| SHA-256 | 4F33295FD8A0F029848C9F4685B9ACE149880967BAA03A454F2C5921EAC83CA3 |
| SSDEEP | 3:SZpW5XAUQumW5Ahcv8wvbFevLATGcLZpLgFoL//EVVLVVvhLYvn:SZpWjx8wZwWJ4GL3+lCn |
| TLSH | T158C02BEA0FC34D9C550F1C5C84038D800312D04133D25D8F12DC227DC5300051614043 |
| Key | Value |
|---|---|
| FileName | ./usr/share/doc/staden-io-lib/test/data/both.run/s_4_0133_sig2.txt.gz |
| FileSize | 7283 |
| MD5 | 7066AADAAE06FA65560CB5AABD0A16CF |
| SHA-1 | 0C0A239FBB17909E3E0F464527B9C7685D66DDD6 |
| SHA-256 | C50FE5B9913F96C87F93274B23AE77516C591822CD00A47448209DA413158B46 |
| SSDEEP | 192:silxIyZY/Ri2vj1BA4UsO7T946/laPvsPUWHWq:FIho27+ld/7UW2q |
| TLSH | T1F1E1AF605C23E796F2AD7037893EF352541F51546D8373FA0A234F13294735E7879582 |
| Key | Value |
|---|---|
| FileName | ./usr/share/doc/staden-io-lib/test/data/xx#rg.sam |
| FileSize | 517 |
| MD5 | 0E155BA2D745BAE67D567DA0BE3CB070 |
| SHA-1 | 0E13B72CC4DE1C7D38D53FED055AB61EACBA375B |
| SHA-256 | 5927A780ECB8FD659A434C7E6CF8917C92EEB39E925FDF964845CD000B2497A9 |
| SSDEEP | 12:tXRGOsKLF0N6DKvo8XTQi05MYu5FEnr8hr8Hr/:lIhWE6DhmQiy6FXa7 |
| TLSH | T1C5F082BA3DA5BC657B827A295BF248F92C6C861F59592E00C5C0F2222ACFD8DC824005 |