Parents (Total: 44)

The searched file hash is included in 44 parent files which include package known and seen by metalookup. A sample is included below:

Key	Value
FileSize	4702600
MD5	F58AEB2541F49CCF8986C8AC92B11301
PackageDescription	development files for the HTSlib HTSlib is an implementation of a unified C library for accessing common file formats, such as SAM (Sequence Alignment/Map), CRAM and VCF (Variant Call Format), used for high-throughput sequencing data, and is the core library used by samtools and bcftools. HTSlib only depends on zlib. It is known to be compatible with gcc, g++ and clang. . HTSlib implements a generalized BAM (binary SAM) index, with file extension ‘csi’ (coordinate-sorted index). The HTSlib file reader first looks for the new index and then for the old if the new index is absent. . This package contains development files for the HTSlib: headers, static library, manual pages, etc. . For compatibility with sambamba, the internal routine cram_to_bam was exported, hereto adopting a patch found in guix.
PackageMaintainer	Ubuntu Developers <ubuntu-devel-discuss@lists.ubuntu.com>
PackageName	libhts-dev
PackageSection	libdevel
PackageVersion	1.10.2-5
SHA-1	0630A72FB596C1F0052EA1766F4EBAFAC1D684F2
SHA-256	6A158C02CBC8C0E496D38E78AF7999F1DCA65A4C84BBE4C6482A584599BD465D

Key	Value
FileSize	338680
MD5	0205B060FB32405C11E7D8A5BED48D2D
PackageDescription	generic indexer for TAB-delimited genome position files Tabix indexes files where some columns indicate sequence coordinates: name (usually a chromosome), start and stop. The input data file must be position sorted and compressed by bgzip (provided in this package), which has a gzip like interface. After indexing, tabix is able to quickly retrieve data lines by chromosomal coordinates. Fast data retrieval also works over network if an URI is given as a file name. . This package is built from the HTSlib source, and provides the bgzip, htsfile, and tabix tools.
PackageMaintainer	Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
PackageName	tabix
PackageSection	science
PackageVersion	1.11-4
SHA-1	0ACA80BACE088C8A1C97C12A5A9272BFA69F7829
SHA-256	B1B70456733CFA9BF29E18B2E8FBA4CDD93253117B2DF375B42A4ECAFE203AA4

Key	Value
FileSize	327896
MD5	88DD439986EF45EA9662F65F9E50A90A
PackageDescription	C library for high-throughput sequencing data formats HTSlib is an implementation of a unified C library for accessing common file formats, such as SAM (Sequence Alignment/Map), CRAM and VCF (Variant Call Format), used for high-throughput sequencing data, and is the core library used by samtools and bcftools. HTSlib only depends on zlib. It is known to be compatible with gcc, g++ and clang. . HTSlib implements a generalized BAM (binary SAM) index, with file extension ‘csi’ (coordinate-sorted index). The HTSlib file reader first looks for the new index and then for the old if the new index is absent.
PackageMaintainer	Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
PackageName	libhts3
PackageSection	libs
PackageVersion	1.11-4
SHA-1	0C8304BC1EC2ADDA4E1DCF3946E89B4325910047
SHA-256	67A23A6D2F36ED458403AF3221E550574118FF5A097D9F7B0C5954B041EA03AF

Key	Value
FileSize	362904
MD5	FF3DCDEAAEEFC41698909531F7A07C85
PackageDescription	C library for high-throughput sequencing data formats HTSlib is an implementation of a unified C library for accessing common file formats, such as SAM (Sequence Alignment/Map), CRAM and VCF (Variant Call Format), used for high-throughput sequencing data, and is the core library used by samtools and bcftools. HTSlib only depends on zlib. It is known to be compatible with gcc, g++ and clang. . HTSlib implements a generalized BAM (binary SAM) index, with file extension ‘csi’ (coordinate-sorted index). The HTSlib file reader first looks for the new index and then for the old if the new index is absent.
PackageMaintainer	Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
PackageName	libhts3
PackageSection	libs
PackageVersion	1.11-4
SHA-1	0D1B157CC2822DFE04ABD512C7384A1C0AFB3D59
SHA-256	2F7611DC50ECF1849AA12B893F19E57C64594A9388C8398B224677ADC5483985

Key	Value
FileSize	367224
MD5	C268E3DA4BF5A435ED582944D22779C8
PackageDescription	generic indexer for TAB-delimited genome position files Tabix indexes files where some columns indicate sequence coordinates: name (usually a chromosome), start and stop. The input data file must be position sorted and compressed by bgzip (provided in this package), which has a gzip like interface. After indexing, tabix is able to quickly retrieve data lines by chromosomal coordinates. Fast data retrieval also works over network if an URI is given as a file name. . This package is built from the HTSlib source, and provides the bgzip, htsfile, and tabix tools.
PackageMaintainer	Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
PackageName	tabix
PackageSection	science
PackageVersion	1.11-4
SHA-1	1AFCA32214A4368AA21E36F585D291686204DC23
SHA-256	9AED4B69AEF251E4964C9B8895C31434DCD0B9636638E7FA6E31FB67ECEFFACE

Key	Value
FileSize	3877640
MD5	8D5E624B827E6B1E2C8868E7F05A40D2
PackageDescription	development files for the HTSlib HTSlib is an implementation of a unified C library for accessing common file formats, such as SAM (Sequence Alignment/Map), CRAM and VCF (Variant Call Format), used for high-throughput sequencing data, and is the core library used by samtools and bcftools. HTSlib only depends on zlib. It is known to be compatible with gcc, g++ and clang. . HTSlib implements a generalized BAM (binary SAM) index, with file extension ‘csi’ (coordinate-sorted index). The HTSlib file reader first looks for the new index and then for the old if the new index is absent. . This package contains development files for the HTSlib: headers, static library, manual pages, etc. . For compatibility with sambamba, the internal routine cram_to_bam was exported, hereto adopting a patch found in guix.
PackageMaintainer	Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
PackageName	libhts-dev
PackageSection	libdevel
PackageVersion	1.11-4
SHA-1	2D925EE59D71DECFB92D31B7FEAC44E6DEC8ED22
SHA-256	E7EF11A5469F242B0ACE8981EF92C265927B8CA0158224BBE4655CD7AFCF25FE

Key	Value
FileSize	345568
MD5	C0AE27F08A6225F02B4915F47F17C472
PackageDescription	C library for high-throughput sequencing data formats HTSlib is an implementation of a unified C library for accessing common file formats, such as SAM (Sequence Alignment/Map), CRAM and VCF (Variant Call Format), used for high-throughput sequencing data, and is the core library used by samtools and bcftools. HTSlib only depends on zlib. It is known to be compatible with gcc, g++ and clang. . HTSlib implements a generalized BAM (binary SAM) index, with file extension ‘csi’ (coordinate-sorted index). The HTSlib file reader first looks for the new index and then for the old if the new index is absent.
PackageMaintainer	Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
PackageName	libhts3
PackageSection	libs
PackageVersion	1.11-4
SHA-1	39E12164796C1CEDA9F07FA330D09BE3319141A9
SHA-256	DACF9B1D5F371980774D09D5D2CB4DD1D206BBF049B765A03E53EB687867C40D

Key	Value
FileSize	308964
MD5	3D634DA39A5AA3B70F5499548BF9D4B1
PackageDescription	generic indexer for TAB-delimited genome position files Tabix indexes files where some columns indicate sequence coordinates: name (usually a chromosome), start and stop. The input data file must be position sorted and compressed by bgzip (provided in this package), which has a gzip like interface. After indexing, tabix is able to quickly retrieve data lines by chromosomal coordinates. Fast data retrieval also works over network if an URI is given as a file name. . This package is built from the HTSlib source, and provides the bgzip, htsfile, and tabix tools.
PackageMaintainer	Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
PackageName	tabix
PackageSection	science
PackageVersion	1.11-4
SHA-1	3BB47B8C56273046ADEEDC6BE19E165C02819732
SHA-256	8BAF57FDC15211688650E9088E7FF03D33C5F7B67BF74390D8573E8DC5A6B139

Key	Value
FileSize	993304
MD5	A4D73A0BFE505C8D00A3F787B7112358
PackageDescription	Test data for HTSlib HTSlib is an implementation of a unified C library for accessing common file formats, such as SAM (Sequence Alignment/Map), CRAM and VCF (Variant Call Format), used for high-throughput sequencing data, and is the core library used by samtools and bcftools. HTSlib only depends on zlib. It is known to be compatible with gcc, g++ and clang. . HTSlib implements a generalized BAM (binary SAM) index, with file extension ‘csi’ (coordinate-sorted index). The HTSlib file reader first looks for the new index and then for the old if the new index is absent. . This package contains test files and scripts for the HTSlib.
PackageMaintainer	Ubuntu Developers <ubuntu-devel-discuss@lists.ubuntu.com>
PackageName	htslib-test
PackageSection	science
PackageVersion	1.10.2-3
SHA-1	3E8748D5DFD3E5DC17E9A9DFFB3F7A592CA02D73
SHA-256	08068D88ADEECFD92417DC82EB0E6D565888825ECEB39BF5FE0285708FC51BCC

Key	Value
FileSize	1010004
MD5	B6394E741A9DC9FCAF6594B890E39C72
PackageDescription	Test data for HTSlib HTSlib is an implementation of a unified C library for accessing common file formats, such as SAM (Sequence Alignment/Map), CRAM and VCF (Variant Call Format), used for high-throughput sequencing data, and is the core library used by samtools and bcftools. HTSlib only depends on zlib. It is known to be compatible with gcc, g++ and clang. . HTSlib implements a generalized BAM (binary SAM) index, with file extension ‘csi’ (coordinate-sorted index). The HTSlib file reader first looks for the new index and then for the old if the new index is absent. . This package contains test files and scripts for the HTSlib.
PackageMaintainer	Ubuntu Developers <ubuntu-devel-discuss@lists.ubuntu.com>
PackageName	htslib-test
PackageSection	science
PackageVersion	1.11-4
SHA-1	4611418BEB399EA1CEEDB3BA8094E428C7C7DAC2
SHA-256	7BD336C1AAF37A03AAD34AAD4988390376B5A5C49026FB4E63F0924451B1C4DD