Key | Value |
---|---|
FileSize | 3877640 |
MD5 | 8D5E624B827E6B1E2C8868E7F05A40D2 |
PackageDescription | development files for the HTSlib HTSlib is an implementation of a unified C library for accessing common file formats, such as SAM (Sequence Alignment/Map), CRAM and VCF (Variant Call Format), used for high-throughput sequencing data, and is the core library used by samtools and bcftools. HTSlib only depends on zlib. It is known to be compatible with gcc, g++ and clang. . HTSlib implements a generalized BAM (binary SAM) index, with file extension ‘csi’ (coordinate-sorted index). The HTSlib file reader first looks for the new index and then for the old if the new index is absent. . This package contains development files for the HTSlib: headers, static library, manual pages, etc. . For compatibility with sambamba, the internal routine cram_to_bam was exported, hereto adopting a patch found in guix. |
PackageMaintainer | Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org> |
PackageName | libhts-dev |
PackageSection | libdevel |
PackageVersion | 1.11-4 |
SHA-1 | 2D925EE59D71DECFB92D31B7FEAC44E6DEC8ED22 |
SHA-256 | E7EF11A5469F242B0ACE8981EF92C265927B8CA0158224BBE4655CD7AFCF25FE |
hashlookup:children-total | 35 |
hashlookup:trust | 50 |
The searched file hash includes 35 children files known and seen by metalookup. A sample is included below:
Key | Value |
---|---|
FileName | ./usr/include/htslib/faidx.h |
FileSize | 12934 |
MD5 | 858BC49C28731A428B501E9A007EB69A |
SHA-1 | 13C5616ECDFAC54BAFC7DCCE79856CBAD3BC9634 |
SHA-256 | DD91170C7498D92554D6B197616A2776301B9F8896F95875350E174A05B8B177 |
SSDEEP | 192:0NQHnEB3mkePZwrBZoFBW9BZoFb91e3QVEo3rvqKPKRPKJPKXD0u3wVUX+lXUey:0NyEBWrPZ8BZoFw9BZoFBR+X+lXUey |
TLSH | T1E642737BA98A12F7631033D1516E9994A338446E73F4E480B05E74283F5ADFAA4FE7C0 |
Key | Value |
---|---|
FileName | ./usr/share/doc/tabix/copyright |
FileSize | 5817 |
MD5 | C4396683955B586E40467017D5C4BFFB |
SHA-1 | 16B56E839115765B2039531ABA1E5643D181B5CC |
SHA-256 | 3B4EA7010E8A7E6BE29E73F4C41714A317C066D0A5908B24DB963C4936B26F40 |
SSDEEP | 96:o+gC7z8lJjJz8RO3iZ3z9wTrlJHJzs9t3i23zNUfNLH4+8P+rQHXebg:Cc8rVYRO3iZ3xirrpg9t3i23hUFLH4U0 |
TLSH | T13AC1F85B3E8407B759E5E7D52AAA78C0F51AD02F3B3B1A04386DE244673B02DD8BF491 |
Key | Value |
---|---|
FileName | ./usr/include/htslib/kbitset.h |
FileSize | 5605 |
MD5 | CF84C8AC0D1197A3BF11293CA2D19875 |
SHA-1 | 178578D11C1F886602C4E8386E264EF0BD3552C7 |
SHA-256 | 5D5815A98C24884CF2FB8483C5FCC201E7A2F3DDAB0C3A48A6E2704BADD425B4 |
SSDEEP | 96:INPOUwQHn+6hAa/Hfk+dEVGPUoV9YaDJiUKZEsaEBmuBIDq6QlpDo:IEQHn1/HM+HP1DDq6sahn |
TLSH | T1D0C1A947B118D3FB3A9A1AB2114E854BF299377F56C7EF54C85B40B81F0541C52F98B4 |
Key | Value |
---|---|
FileName | ./usr/include/htslib/synced_bcf_reader.h |
FileSize | 15795 |
MD5 | 5B23C3DD90D3DF3D872E2FFFDF36E8A5 |
SHA-1 | 25C5228BA2051233BCD7EEFCE27B01EFD4BE16C7 |
SHA-256 | 6BD4158954228C745903B0A39B289BF0F10BA87B59126FB9CE3D6717CA6C656B |
SSDEEP | 384:qG2o+taL/fKH6LK5A4v6mNV5IJCaZhgDB8+:5qM06mpI/28+ |
TLSH | T1C762831EA44D23A3490032B5A3D9B5C02235E04BF2669468F34FD26C5FCD4ED92F6EE5 |
Key | Value |
---|---|
FileName | ./usr/include/htslib/khash_str2int.h |
FileSize | 4050 |
MD5 | 163C505B6A47B236C04F9455EE4C493C |
SHA-1 | 277BB828BF436B3286AA0C3E0C19BC3639A3415B |
SHA-256 | 9D317EED7880722916B6C0ABE90C672C8DBC99A119762D62E22C387E236B2541 |
SSDEEP | 96:ymupQHnoJyspjGLwLANLMZZf5tlbWZLJlEL55EMNDaKEqNDMjjP2Tr:uQHnoy4+a9Zf3lbWzl055dawMjjOr |
TLSH | T184814185B9D351124CB00EBE777A2878A60E20AB62FDB550FC5B3A501F46056E3BFDA0 |
Key | Value |
---|---|
FileName | ./usr/include/htslib/bgzf.h |
FileSize | 16081 |
MD5 | 0EB8EA58E56C136B50432EC3AB49C4E1 |
SHA-1 | 2BF8014CEFFFE7C35E2C892A7939D8D42403E58D |
SHA-256 | 3BFDA471DA41A1FE2F3BB57A3EA32967432639E292F4A55D5C2F53EF7B143287 |
SSDEEP | 192:D0QHd6I6dQ9BstC3LBNfEuXV1XFmYrCmFVzghzj8moSzNECZi1BiH5PGoNJy86sJ:D0YUOBplJEyEYxB8qnZp8x5L |
TLSH | T14C7296575DEE497B07605C718F06A5D4E111E22F33A58AD0B52E7B782F4EF24A8F22D0 |
Key | Value |
---|---|
FileName | ./usr/include/htslib/ksort.h |
FileSize | 11480 |
MD5 | 9F7B758259A19A6BE0AC9DE80E1D62DC |
SHA-1 | 30FB9E849FE0877CB4C1B3CA4651BC772A14C5E1 |
SHA-256 | 7047CFC6B5352EC7C6C00ECB21DF92EA14D81AEB7D5B0457246924E0C20BCF60 |
SSDEEP | 192:IMQHngVmlycVlBQQf+nufvN5UrIs0PrkwDMn0HXTd0rm8ZR7:IMygIXNJMW8R7 |
TLSH | T14D323125BF9D312114DE62765B48848D720FE47F9253ACDA3ECC55AB042783C03BEEA9 |
Key | Value |
---|---|
FileName | ./usr/include/htslib/cram.h |
FileSize | 15930 |
MD5 | 2AD9B781BCDD52A35F622E396D2BFCFF |
SHA-1 | 31D13FE4CE2D7280B3D2AE20E602ADEBCCD2DFED |
SHA-256 | 3B8BA3070901CE502B3028950FAF586ED7137733F930FB94C7389A6EB2285FDC |
SSDEEP | 192:mQHnJBMY7SF+e9UFFHWZNnCoR3VfVyA5hU/U/ouEU8VvK3/YTy:mGUYgiFH+CoR31ArstgvK3/Ym |
TLSH | T141624147BE7D11BA6461C47C8A5E8048FF50C40B72A5B450F4AED1BC6F488EA61BEFC6 |
Key | Value |
---|---|
FileName | ./usr/include/htslib/kfunc.h |
FileSize | 2828 |
MD5 | 905AFA0BBFC0CAE217B909AEF543FA93 |
SHA-1 | 321FBF08C748BE808A2C98DBAFCED994EB5479A3 |
SHA-256 | 9DBE4F59DAE695755F6E94E8AF13591A0CD042C917296E9D9F9C43ADC1F2D9CA |
SSDEEP | 48:IbjJcT8JxPPvGUubQH+sZIT983+kFUtSTP0Pr9+3JGoX0GVLZ:I3hPOUwQHn+9tzQG+0Y |
TLSH | T11751D64E79183BB38D5665F155EBB1C8F122A166B6EA958B802FD0C10F128C870BDDB9 |
Key | Value |
---|---|
FileName | ./usr/include/htslib/klist.h |
FileSize | 5135 |
MD5 | 5B880009152FB7062F2680D401AC7424 |
SHA-1 | 35F3106D13C5449F85D3C5832CFB0459D73B2DEC |
SHA-256 | 47D08A5BBB7963F2BC5B5A0537B1E062097B3D23CA383CDEBB7DFF9AC9B57B2F |
SSDEEP | 96:I5POUwQHn+7wscFE91M6jh/P7M7MF70I8B2:IAQHnWws391Zjh/P7M747O2 |
TLSH | T1E4B142182E6B105660D8A9313D446458422BE67FE96F4DCB7EC2E47B081F42993FECED |